| Author: | David Goodger |
|---|---|
| Contact: | goodger@users.sourceforge.net |
| Revision: | 3974 |
| Date: | 2005-10-29 |
| Copyright: | This document has been placed in the public domain. |
There are several problems, unresolved issues, and areas of controversy within StructuredText (Classic and Next Generation). In order to resolve all these issues, this analysis brings all of the issues out into the open, enumerates all the alternatives, and proposes solutions to be incorporated into the reStructuredText specification.
The description in the original StructuredText.py has been criticized for being vague. For practical purposes, "the code is the spec." Tony Ibbs has been working on deducing a detailed description from the documentation and code of StructuredTextNG. Edward Loper's STMinus is another attempt to formalize a spec.
For this kind of a project, the specification should always precede the code. Otherwise, the markup is a moving target which can never be adopted as a standard. Of course, a specification may be revised during lifetime of the code, but without a spec there is no visible control and thus no confidence.
The original StructuredText is a dense mass of sparsely commented code and inscrutable regular expressions. It was not designed to be extended and is very difficult to understand. StructuredTextNG has been designed to allow input (syntax) and output extensions, but its documentation (both internal [comments & docstrings], and external) is inadequate for the complexity of the code itself.
For reStructuredText to become truly useful, perhaps even part of Python's standard library, it must have clear, understandable documentation and implementation code. For the implementation of reStructuredText to be taken seriously, it must be a sterling example of the potential of docstrings; the implementation must practice what the specification preaches.
Setext required that body text be indented by 2 spaces. The original StructuredText and StructuredTextNG require that section structure be indicated through indentation, as "inspired by Python". For certain structures with a very limited, local extent (such as lists, block quotes, and literal blocks), indentation naturally indicates structure or hierarchy. For sections (which may have a very large extent), structure via indentation is unnecessary, unnatural and ambiguous. Rather, the syntax of the section title itself should indicate that it is a section title.
The original StructuredText states that "A single-line paragraph whose immediately succeeding paragraphs are lower level is treated as a header." Requiring indentation in this way is:
Python's use of significant whitespace is a wonderful (if not original) innovation, however requiring indentation in ordinary written text is hypergeneralization.
reStructuredText indicates section structure through title adornment style (as exemplified by this document). This is far more natural. In fact, it is already in widespread use in plain text documents, including in Python's standard distribution (such as the toplevel README file).
No matter what characters are chosen for markup, some day someone will want to write documentation about that markup or using markup characters in a non-markup context. Therefore, any complete markup language must have an escaping or encoding mechanism. For a lightweight markup system, encoding mechanisms like SGML/XML's '*' are out. So an escaping mechanism is in. However, with carefully chosen markup, it should be necessary to use the escaping mechanism only infrequently.
reStructuredText needs an escaping mechanism: a way to treat markup-significant characters as the characters themselves. Currently there is no such mechanism (although ZWiki uses '!'). What are the candidates?
The best choice for this is the backslash (\). It's "the single most popular escaping character in the world!", therefore familiar and unsurprising. Since characters only need to be escaped under special circumstances, which are typically those explaining technical programming issues, the use of the backslash is natural and understandable. Python docstrings can be raw (prefixed with an 'r', as in 'r""'), which would obviate the need for gratuitous doubling-up of backslashes.
(On 2001-03-29 on the Doc-SIG mailing list, GvR endorsed backslash escapes, saying, "'nuff said. Backslash it is." Although neither legally binding nor irrevocable nor any kind of guarantee of anything, it is a good sign.)
The rule would be: An unescaped backslash followed by any markup character escapes the character. The escaped character represents the character itself, and is prevented from playing a role in any markup interpretation. The backslash is removed from the output. A literal backslash is represented by an "escaped backslash," two backslashes in a row.
A carefully constructed set of recognition rules for inline markup will obviate the need for backslash-escapes in almost all cases; see Delimitation of Inline Markup below.
When an expression (requiring backslashes and other characters used for markup) becomes too complicated and therefore unreadable, a literal block may be used instead. Inside literal blocks, no markup is recognized, therefore backslashes (for the purpose of escaping markup) become unnecessary.
We could allow backslashes preceding non-markup characters to remain in the output. This would make describing regular expressions and other uses of backslashes easier. However, this would complicate the markup rules and would be confusing.
Oft-requested in Doc-SIG (the earliest reference is dated 1996-08-13) is the ability to write lists without requiring blank lines between items. In docstrings, space is at a premium. Authors want to convey their API or usage information in as compact a form as possible. StructuredText requires blank lines between all body elements, including list items, even when boundaries are obvious from the markup itself.
In reStructuredText, blank lines are optional between list items. However, in order to eliminate ambiguity, a blank line is required before the first list item and after the last. Nested lists also require blank lines before the list start and after the list end.
StructuredText includes 'o' as a bullet character. This is dangerous and counter to the language-independent nature of the markup. There are many languages in which 'o' is a word. For example, in Spanish:
Llamame a la casa o al trabajo. (Call me at home or at work.)
And in Japanese (when romanized):
Senshuu no doyoubi ni tegami o kakimashita. ([I] wrote a letter on Saturday last week.)
If a paragraph containing an 'o' word wraps such that the 'o' is the first text on a line, or if a paragraph begins with such a word, it could be misinterpreted as a bullet list.
In reStructuredText, 'o' is not used as a bullet character. '-', '*', and '+' are the possible bullet characters.
StructuredText enumerated lists are allowed to begin with numbers and letters followed by a period or right-parenthesis, then whitespace. This has surprising consequences for writing styles. For example, this is recognized as an enumerated list item by StructuredText:
Mr. Creosote.
People will write enumerated lists in all different ways. It is folly to try to come up with the "perfect" format for an enumerated list, and limit the docstring parser's recognition to that one format only.
Rather, the parser should recognize a variety of enumerator styles. It is also recommended that the enumerator of the first list item be ordinal-1 ('1', 'A', 'a', 'I', or 'i'), as output formats may not be able to begin a list at an arbitrary enumeration.
An initial idea was to require two or more consistent enumerated list items in a row. This idea proved impractical and was dropped. In practice, the presence of a proper enumerator is enough to reliably recognize an enumerated list item; any ambiguities are reported by the parser. Here's the original idea for posterity:
The parser should recognize a variety of enumerator styles, mark each block as a potential enumerated list item (PELI), and interpret the enumerators of adjacent PELIs to decide whether they make up a consistent enumerated list.
If a PELI is labeled with a "1.", and is immediately followed by a PELI labeled with a "2.", we've got an enumerated list. Or "(A)" followed by "(B)". Or "i)" followed by "ii)", etc. The chances of accidentally recognizing two adjacent and consistently labeled PELIs, are acceptably small.
For an enumerated list to be recognized, the following must be true:
- the list must consist of multiple adjacent list items (2 or more)
- the enumerators must all have the same format
- the enumerators must be sequential
StructuredText uses ' -- ' (whitespace, two hyphens, whitespace) on the first line of a paragraph to indicate a definition list item. The ' -- ' serves to separate the term (on the left) from the definition (on the right).
Many people use ' -- ' as an em-dash in their text, conflicting with the StructuredText usage. Although the Chicago Manual of Style says that spaces should not be used around an em-dash, Peter Funk pointed out that this is standard usage in German (according to the Duden, the official German reference), and possibly in other languages as well. The widespread use of ' -- ' precludes its use for definition lists; it would violate the "unsurprising" criterion.
A simpler, and at least equally visually distinctive construct (proposed by Guido van Rossum, who incidentally is a frequent user of ' -- ') would do just as well:
term 1
Definition.
term 2
Definition 2, paragraph 1.
Definition 2, paragraph 2.
A reStructuredText definition list item consists of a term and a definition. A term is a simple one-line paragraph. A definition is a block indented relative to the term, and may contain multiple paragraphs and other body elements. No blank line precedes a definition (this distinguishes definition lists from block quotes).
The StructuredText specification has literal blocks indicated by 'example', 'examples', or '::' ending the preceding paragraph. STNG only recognizes '::'; 'example'/'examples' are not implemented. This is good; it fixes an unnecessary language dependency. The problem is what to do with the sometimes- unwanted '::'.
In reStructuredText '::' at the end of a paragraph indicates that subsequent indented blocks are treated as literal text. No further markup interpretation is done within literal blocks (not even backslash-escapes). If the '::' is preceded by whitespace, '::' is omitted from the output; if '::' was the sole content of a paragraph, the entire paragraph is removed (no 'empty' paragraph remains). If '::' is preceded by a non-whitespace character, '::' is replaced by ':' (i.e., the extra colon is removed).
Thus, a section could begin with a literal block as follows:
Section Title
-------------
::
print "this is example literal"
The table markup scheme in classic StructuredText was horrible. Its omission from StructuredTextNG is welcome, and its markup will not be repeated here. However, tables themselves are useful in documentation. Alternatives:
This format is the most natural and obvious. It was independently invented (no great feat of creation!), and later found to be the format supported by the Emacs table mode:
+------------+------------+------------+--------------+ | Header 1 | Header 2 | Header 3 | Header 4 | +============+============+============+==============+ | Column 1 | Column 2 | Column 3 & 4 span (Row 1) | +------------+------------+------------+--------------+ | Column 1 & 2 span | Column 3 | - Column 4 | +------------+------------+------------+ - Row 2 & 3 | | 1 | 2 | 3 | - span | +------------+------------+------------+--------------+
Tables are described with a visual outline made up of the characters '-', '=', '|', and '+':
Row and column spans are possible simply by omitting the column or row separators, respectively. The header row separator must be complete; in other words, a header cell may not span into the table body. Each cell contains body elements, and may have multiple paragraphs, lists, etc. Initial spaces for a left margin are allowed; the first line of text in a cell determines its left margin.
Below is a simpler table structure. It may be better suited to manual input than alternative #1, but there is no Emacs editing mode available. One disadvantage is that it resembles section titles; a one-column table would look exactly like section & subsection titles.
============ ============ ============ ==============
Header 1 Header 2 Header 3 Header 4
============ ============ ============ ==============
Column 1 Column 2 Column 3 & 4 span (Row 1)
------------ ------------ ---------------------------
Column 1 & 2 span Column 3 - Column 4
------------------------- ------------ - Row 2 & 3
1 2 3 - span
============ ============ ============ ==============
The table begins with a top border of equals signs with a space at each column boundary (regardless of spans). Each row is underlined. Internal row separators are underlines of '-', with spaces at column boundaries. The last of the optional head rows is underlined with '=', again with spaces at column boundaries. Column spans have no spaces in their underline. Row spans simply lack an underline at the row boundary. The bottom boundary of the table consists of '=' underlines. A blank line is required following a table.
A minimalist alternative is as follows:
==== ===== ======== ======== ======= ==== ===== ===== Old State Input Action New State Notes ----------- -------- ----------------- ----------- ids types new type sys.msg. dupname ids types ==== ===== ======== ======== ======= ==== ===== ===== -- -- explicit -- -- new True -- -- implicit -- -- new False None False explicit -- -- new True old False explicit implicit old new True None True explicit explicit new None True old True explicit explicit new,old None True [1] None False implicit implicit new None False old False implicit implicit new,old None False None True implicit implicit new None True old True implicit implicit new old True ==== ===== ======== ======== ======= ==== ===== =====
The table begins with a top border of equals signs with one or more spaces at each column boundary (regardless of spans). There must be at least two columns in the table (to differentiate it from section headers). Each line starts a new row. The rightmost column is unbounded; text may continue past the edge of the table. Each row/line must contain spaces at column boundaries, except for explicit column spans. Underlines of '-' can be used to indicate column spans, but should be used sparingly if at all. Lines containing column span underlines may not contain any other text. The last of the optional head rows is underlined with '=', again with spaces at column boundaries. The bottom boundary of the table consists of '=' underlines. A blank line is required following a table.
This table sums up the features. Using all the features in such a small space is not pretty though:
======== ======== ========
Header 2 & 3 Span
------------------
Header 1 Header 2 Header 3
======== ======== ========
Each line is a new row.
Each row consists of one line only.
Row spans are not possible.
The last column may spill over to the right.
Column spans are possible with an underline joining columns.
----------------------------
The span is limited to the row above the underline.
======== ======== ========
As a variation of alternative 3, bullet list syntax in the first column could be used to indicate row starts. Multi-line rows are possible, but row spans are not. For example:
===== =====
col 1 col 2
===== =====
- 1 Second column of row 1.
- 2 Second column of row 2.
Second line of paragraph.
- 3 Second column of row 3.
Second paragraph of row 3,
column 2
===== =====
Column spans would be indicated on the line after the last line of the row. To indicate a real bullet list within a first-column cell, simply nest the bullets.
In a further variation, we could simply assume that whitespace in the first column implies a multi-line row; the text in other columns is continuation text. For example:
===== =====
col 1 col 2
===== =====
1 Second column of row 1.
2 Second column of row 2.
Second line of paragraph.
3 Second column of row 3.
Second paragraph of row 3,
column 2
===== =====
Limitations of this approach:
Combining alternative 3 and 4, a bullet list in the first column could mean multi-line rows, and no bullet list means single-line rows only.
Alternatives 1 and 5 has been adopted by reStructuredText.
StructuredText specifies that inline markup must begin with whitespace, precluding such constructs as parenthesized or quoted emphatic text:
"**What?**" she cried. (*exit stage left*)
The reStructuredText markup specification allows for such constructs and disambiguates inline markup through a set of recognition rules. These recognition rules define the context of markup start-strings and end-strings, allowing markup characters to be used in most non-markup contexts without a problem (or a backslash). So we can say, "Use asterisks (*) around words or phrases to emphasisze them." The '(*)' will not be recognized as markup. This reduces the need for markup escaping to the point where an escape character is almost (but not quite!) unnecessary.
StructuredText uses '_text_' to indicate underlining. To quote David Ascher in his 2000-01-21 Doc-SIG mailing list post, "Docstring grammar: a very revised proposal":
The tagging of underlined text with _'s is suboptimal. Underlines shouldn't be used from a typographic perspective (underlines were designed to be used in manuscripts to communicate to the typesetter that the text should be italicized -- no well-typeset book ever uses underlines), and conflict with double-underscored Python variable names (__init__ and the like), which would get truncated and underlined when that effect is not desired. Note that while complete markup would prevent that truncation ('__init__'), I think of docstring markups much like I think of type annotations -- they should be optional and above all do no harm. In this case the underline markup does harm.
Underlining is not part of the reStructuredText specification.
StructuredText's markup for inline literals (text left as-is, verbatim, usually in a monospaced font; as in HTML <TT>) is single quotes ('literals'). The problem with single quotes is that they are too often used for other purposes:
Apostrophes: "Don't blame me, 'cause it ain't mine, it's Chris'.";
Quoting text:
First Bruce: "Well Bruce, I heard the prime minister use it. 'S'hot enough to boil a monkey's bum in 'ere your Majesty,' he said, and she smiled quietly to herself."
In the UK, single quotes are used for dialogue in published works.
String literals: s = ''
Alternatives:
'text' \'text\' ''text'' "text" \"text\" ""text"" #text# @text@ `text` ^text^ ``text'' ``text``
The examples below contain inline literals, quoted text, and apostrophes. Each example should evaluate to the following HTML:
Some <TT>code</TT>, with a 'quote', "double", ain't it grand?
Does <TT>a[b] = 'c' + "d" + `2^3`</TT> work?
0. Some code, with a quote, double, ain't it grand?
Does a[b] = 'c' + "d" + `2^3` work?
1. Some 'code', with a \'quote\', "double", ain\'t it grand?
Does 'a[b] = \'c\' + "d" + `2^3`' work?
2. Some \'code\', with a 'quote', "double", ain't it grand?
Does \'a[b] = 'c' + "d" + `2^3`\' work?
3. Some ''code'', with a 'quote', "double", ain't it grand?
Does ''a[b] = 'c' + "d" + `2^3`'' work?
4. Some "code", with a 'quote', \"double\", ain't it grand?
Does "a[b] = 'c' + "d" + `2^3`" work?
5. Some \"code\", with a 'quote', "double", ain't it grand?
Does \"a[b] = 'c' + "d" + `2^3`\" work?
6. Some ""code"", with a 'quote', "double", ain't it grand?
Does ""a[b] = 'c' + "d" + `2^3`"" work?
7. Some #code#, with a 'quote', "double", ain't it grand?
Does #a[b] = 'c' + "d" + `2^3`# work?
8. Some @code@, with a 'quote', "double", ain't it grand?
Does @a[b] = 'c' + "d" + `2^3`@ work?
9. Some `code`, with a 'quote', "double", ain't it grand?
Does `a[b] = 'c' + "d" + \`2^3\`` work?
10. Some ^code^, with a 'quote', "double", ain't it grand?
Does ^a[b] = 'c' + "d" + `2\^3`^ work?
11. Some ``code'', with a 'quote', "double", ain't it grand?
Does ``a[b] = 'c' + "d" + `2^3`'' work?
12. Some ``code``, with a 'quote', "double", ain't it grand?
Does ``a[b] = 'c' + "d" + `2^3\``` work?
Backquotes (#9 & #12) are the best choice. They are unobtrusive and relatviely rarely used (more rarely than ' or ", anyhow). Backquotes have the connotation of 'quotes', which other options (like carets, #10) don't.
Analogously with *emph* & **strong**, double-backquotes (#12) could be used for inline literals. If single-backquotes are used for 'interpreted text' (context-sensitive domain-specific descriptive markup) such as function name hyperlinks in Python docstrings, then double-backquotes could be used for absolute-literals, wherein no processing whatsoever takes place. An advantage of double-backquotes would be that backslash-escaping would no longer be necessary for embedded single-backquotes; however, embedded double-backquotes (in an end-string context) would be illegal. See Backquotes in Phrase-Links in Record of reStructuredText Syntax Alternatives.
Alternative choices are carets (#10) and TeX-style quotes (#11). For examples of TeX-style quoting, see http://www.zope.org/Members/jim/StructuredTextWiki/CustomizingTheDocumentProcessor.
Some existing uses of backquotes:
The inline markup start-string and end-string recognition rules defined by the reStructuredText markup specification would allow all of these cases inside inline literals, with very few exceptions. As a fallback, literal blocks could handle all cases.
Outside of inline literals, the above uses of backquotes would require backslash-escaping. However, these are all prime examples of text that should be marked up with inline literals.
If either backquotes or straight single-quotes are used as markup, TeX-quotes are too troublesome to support, so no special-casing of TeX-quotes should be done (at least at first). If TeX-quotes have to be used outside of literals, a single backslash-escaped would suffice: ``TeX quote''. Ugly, true, but very infrequently used.
Using literal blocks is a fallback option which removes the need for backslash-escaping:
like this::
Here, we can do ``absolutely'' anything `'`'\|/|\ we like!
No mechanism for inline literals is perfect, just as no escaping mechanism is perfect. No matter what we use, complicated inline expressions involving the inline literal quote and/or the backslash will end up looking ugly. We can only choose the least often ugly option.
reStructuredText will use double backquotes for inline literals, and single backqoutes for interpreted text.
There are three forms of hyperlink currently in StructuredText:
(Absolute & relative URIs.) Text enclosed by double quotes followed by a colon, a URI, and concluded by punctuation plus white space, or just white space, is treated as a hyperlink:
"Python":http://www.python.org/
(Absolute URIs only.) Text enclosed by double quotes followed by a comma, one or more spaces, an absolute URI and concluded by punctuation plus white space, or just white space, is treated as a hyperlink:
"mail me", mailto:me@mail.com
(Endnotes.) Text enclosed by brackets link to an endnote at the end of the document: at the beginning of the line, two dots, a space, and the same text in brackets, followed by the end note itself:
Please refer to the fine manual [GVR2001]. .. [GVR2001] Python Documentation, Release 2.1, van Rossum, Drake, et al., http://www.python.org/doc/
The problem with forms 1 and 2 is that they are neither intuitive nor unobtrusive (they break design goals 5 & 2). They overload double-quotes, which are too often used in ordinary text (potentially breaking design goal 4). The brackets in form 3 are also too common in ordinary text (such as [nested] asides and Python lists like [12]).
Alternatives:
Have no special markup for hyperlinks.
Interpret and mark up hyperlinks as any contiguous text containing '://' or ':...@' (absolute URI) or '@' (email address) after an alphanumeric word. To de-emphasize the URI, simply enclose it in parentheses:
Python (http://www.python.org/)
Leave special hyperlink markup as a domain-specific extension. Hyperlinks in ordinary reStructuredText documents would be required to be standalone (i.e. the URI text inline in the document text). Processed hyperlinks (where the URI text is hidden behind the link) are important enough to warrant syntax.
The original Setext introduced a mechanism of indirect hyperlinks. A source link word ('hot word') in the text was given a trailing underscore:
Here is some text with a hyperlink_ built in.
The hyperlink itself appeared at the end of the document on a line by itself, beginning with two dots, a space, the link word with a leading underscore, whitespace, and the URI itself:
.. _hyperlink http://www.123.xyz
Setext used underscores_instead_of_spaces_ for phrase links.
With some modification, alternative 3 best satisfies the design goals. It has the advantage of being readable and relatively unobtrusive. Since each source link must match up to a target, the odd variable ending in an underscore can be spared being marked up (although it should generate a "no such link target" warning). The only disadvantage is that phrase-links aren't possible without some obtrusive syntax.
We could achieve phrase-links if we enclose the link text:
in double quotes:
"like this"_
in brackets:
[like this]_
or in backquotes:
`like this`_
Each gives us somewhat obtrusive markup, but that is unavoidable. The bracketed syntax (#2) is reminiscent of links on many web pages (intuitive), although it is somewhat obtrusive. Alternative #3 is much less obtrusive, and is consistent with interpreted text: the trailing underscore indicates the interpretation of the phrase, as a hyperlink. #3 also disambiguates hyperlinks from footnote references. Alternative #3 wins.
The same trailing underscore markup can also be used for footnote and citation references, removing the problem with ordinary bracketed text and Python lists:
Please refer to the fine manual [GVR2000]_. .. [GVR2000] Python Documentation, van Rossum, Drake, et al., http://www.python.org/doc/
The two-dots-and-a-space syntax was generalized by Setext for comments, which are removed from the (visible) processed output. reStructuredText uses this syntax for comments, footnotes, and link target, collectively termed "explicit markup". For link targets, in order to eliminate ambiguity with comments and footnotes, reStructuredText specifies that a colon always follow the link target word/phrase. The colon denotes 'maps to'. There is no reason to restrict target links to the end of the document; they could just as easily be interspersed.
Internal hyperlinks (links from one point to another within a single document) can be expressed by a source link as before, and a target link with a colon but no URI. In effect, these targets 'map to' the element immediately following.
As an added bonus, we now have a perfect candidate for reStructuredText directives, a simple extension mechanism: explicit markup containing a single word followed by two colons and whitespace. The interpretation of subsequent data on the directive line or following is directive-dependent.
To summarize:
.. This is a comment. .. The line below is an example of a directive. .. version:: 1 This is a footnote [1]_. This internal hyperlink will take us to the footnotes_ area below. Here is a one-word_ external hyperlink. Here is `a hyperlink phrase`_. .. _footnotes: .. [1] Footnote text goes here. .. external hyperlink target mappings: .. _one-word: http://www.123.xyz .. _a hyperlink phrase: http://www.123.xyz
The presence or absence of a colon after the target link differentiates an indirect hyperlink from a footnote, respectively. A footnote requires brackets. Backquotes around a target link word or phrase are required if the phrase contains a colon, optional otherwise.
Below are examples using no markup, the two StructuredText hypertext styles, and the reStructuredText hypertext style. Each example contains an indirect link, a direct link, a footnote/endnote, and bracketed text. In HTML, each example should evaluate to:
<P>A <A HREF="http://spam.org">URI</A>, see <A HREF="#eggs2000"> [eggs2000]</A> (in Bacon [Publisher]). Also see <A HREF="http://eggs.org">http://eggs.org</A>.</P> <P><A NAME="eggs2000">[eggs2000]</A> "Spam, Spam, Spam, Eggs, Bacon, and Spam"</P>
No markup:
A URI http://spam.org, see eggs2000 (in Bacon [Publisher]). Also see http://eggs.org. eggs2000 "Spam, Spam, Spam, Eggs, Bacon, and Spam"
StructuredText absolute/relative URI syntax ("text":http://www.url.org):
A "URI":http://spam.org, see [eggs2000] (in Bacon [Publisher]). Also see "http://eggs.org":http://eggs.org. .. [eggs2000] "Spam, Spam, Spam, Eggs, Bacon, and Spam"
Note that StructuredText does not recognize standalone URIs, forcing doubling up as shown in the second line of the example above.
StructuredText absolute-only URI syntax ("text", mailto:you@your.com):
A "URI", http://spam.org, see [eggs2000] (in Bacon [Publisher]). Also see "http://eggs.org", http://eggs.org. .. [eggs2000] "Spam, Spam, Spam, Eggs, Bacon, and Spam"
reStructuredText syntax:
4. A URI_, see [eggs2000]_ (in Bacon [Publisher]). Also see http://eggs.org. .. _URI: http:/spam.org .. [eggs2000] "Spam, Spam, Spam, Eggs, Bacon, and Spam"
The bracketed text '[Publisher]' may be problematic with StructuredText (syntax 2 & 3).
reStructuredText's syntax (#4) is definitely the most readable. The text is separated from the link URI and the footnote, resulting in cleanly readable text.